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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825133.1_cds_XP_016502223.1_15889
CDS Infomation

[gene=LOC107820447] [db_xref=GeneID:107820447] [protein=metacaspase-3-like] [protein_id=XP_016502223.1] [location=join(97386..97815,98158..98488,98577..98691,99092..99250,99334..99393)] [gbkey=CDS]
Sequence

ATGGACAGCAGGAGATGTAAATGCAAGTGGTGCGGCACGAAAATGTCAGCTCCCATTGGA
GCACAAACCATTTCCTGCCCAAGGTGCCAATCTGTTACACAACTCCAACCTCCAAGAAAC
AACAACGGCTTTGCCGCTGGGGTTATTAACAATATTATGGGTGCAGTAGTTAACACAGGG
TTTCCAGCAAGGCTGGGAAGGATGAATCCAACAAATGCCAATAATTGTCAGCCTCAACTG
TTCAACATGTCACCACAGATTACTATGCAACCTCCAGCGGTTCATGGACGAAAACGAGCG
GTACTCTGTGGAATAACCTACCGTGGGCATTCCAAGAGTCTGAAAGGAAGCATTAACGAC
GTTTTATCCATGAGATATCTTCTGGTTCAGAAGTTGGGTTTCCCCAATGCATCTGTACTT
GTCCTTACAGAGGATGAGAAAGATCCATACAAAATCCCAACCAAGGGCAATATCAGATCA
GCCCTACGTTGGCTTGTTCATGGTTGTCAGCCAGGAGATTCACTAGTGTTCCACTACTCT
GGCCATGGCACACGAGTAAGAGACCGTGATGGCGATGAGGTTGATGGGAATGATGAATCA
CTATGCCCTGTTGATTTTGAGACTGAAGGAAGAATACTAGATGATGAGATTAATAATACC
ATTGTTAGGCCTTTACCCTGTGGAGCCACACTTCATGGCATAATTGATACTTGCTTCAGT
GGAACTTTCCTGGATTTGCCGTTCATGTGCAGAATAAACAGGGCGGGACACTTCATGTGG
GAAGACCATCGTATCAGCACATACAAAGGTACTAGAGGAGGAACAGCAATCTCTATCAGT
GCCTGTGATGATCATCAAAATTCTGGAGATACAACAGCTTTCACAGGCTTTCCGACAGGT
GCCCTGACATATAGTTTCATCAAAACATTGGAGCAAGAGACCAAATTGACTTACGGACGC
TTACTTATGAGTATGCACAATAAGATTCATGAAGCACAGAAAGGAGTAGGCATGAATGGT
GCAAATGAAACTCAGGAGCCTCAATTATCCGCGTCTGAGCAGTTTGATATTCACTCGAAG
ATGGTGGCTTTGTAG

Peptide Sequence

PEP ID

XP_016502223.1
PEP Infomation

PREDICTED: metacaspase-3-like [Nicotiana tabacum]
Sequence

MDSRRCKCKWCGTKMSAPIGAQTISCPRCQSVTQLQPPRNNNGFAAGVINNIMGAVVNTG
FPARLGRMNPTNANNCQPQLFNMSPQITMQPPAVHGRKRAVLCGITYRGHSKSLKGSIND
VLSMRYLLVQKLGFPNASVLVLTEDEKDPYKIPTKGNIRSALRWLVHGCQPGDSLVFHYS
GHGTRVRDRDGDEVDGNDESLCPVDFETEGRILDDEINNTIVRPLPCGATLHGIIDTCFS
GTFLDLPFMCRINRAGHFMWEDHRISTYKGTRGGTAISISACDDHQNSGDTTAFTGFPTG
ALTYSFIKTLEQETKLTYGRLLMSMHNKIHEAQKGVGMNGANETQEPQLSASEQFDIHSK
MVAL

Transcript Sequence

Gene sequence data has not been registered.